BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C04LP1|AL428868
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 1783 0.0
>3x_Contig1663
Length = 13533
Score = 1783 bits (898), Expect = 0.0
Identities = 917/922 (99%), Gaps = 2/922 (0%)
Strand = Plus / Minus
Query: 1 gatccttcccctgaaagatatcaaagtcaaggaacaccagagaggtatcagcaaaattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 gatccttcccctgaaagatatcaaagtcaaggaacaccagagaggtatcagcaaaattac 2101
Query: 61 gctgagaactattccaacactgtggaatctggacctaactactcattaaaacaatacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2100 gctgagaactattccaacactgtggaatctggacctaactactcattaaaacaatacact 2041
Query: 121 ccgccggaagctgatcagcagtttaagcagcaccagctaccgccaacacaaccagggggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 ccgccggaagctgatcagcagtttaagcagcaccagctaccgccaacacaaccagggggc 1981
Query: 181 catccttcagaacatggtagaacccactttaaagcacaatacccccaaagccagccaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1980 catccttcagaacatggtagaacccactttaaagcacaatacccccaaagccagccaaat 1921
Query: 241 caccaacatccgtatcaaaacgctaattacaacggacctgcttataattcttcagctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1920 caccaacatccgtatcaaaacgctaattacaacggacctgcttataattcttcagctggt 1861
Query: 301 ttcaatccaccaaacgtacaacaagctacttatgagacaattgctgaatctggcgatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 ttcaatccaccaaacgtacaacaagctacttatgagacaattgctgaatctggcgatttt 1801
Query: 361 tcgtctgtgtctcagcgcgaacaatatcgtagagaaggcgaaccaaggatcccacaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 tcgtctgtgtctcagcgcgaacaatatcgtagagaaggcgaaccaaggatcccacaaagt 1741
Query: 421 ttgcctcatctagaggttgagggacagaattctttctcaaatgctcgtgcccctttttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 ttgcctcatctagaggttgagggacagaattctttctcaaatgctcgtgcccctttttcc 1681
Query: 481 ccccactcaaactctaatatgaatcctcatatgagttcaccaattgatgaaacacctact 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1680 ccccactcaaactctaatatgaatcctcatatgagtgcaccaattgatgaaacacctact 1621
Query: 541 ccccttggtgtgaatgatagagagatgcggggaagaataccaagacatttagctcaacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 ccccttggtgtgaatgatagagagatgcggggaagaataccaagacatttagctcaacca 1561
Query: 601 aacttatattctcgtcaacatggagcaccaagacaagtgtctccagattatgatgcgaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 aacttatattctcgtcaacatggagcaccaagacaagtgtctccagattatgatgcgaga 1501
Query: 661 accatgcacccgggaaccatgcacccgggaccaaatgcacatattcctcaaggtacatcy 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 accatgcacccgggaaccatgcacccgggaccaaatgcacatattcctcaaggtacatcc 1441
Query: 721 tatggtatgcatcaacatatgccacaaggcaaggttcctgtacgggga-cgcctaatggt 779
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1440 tatggtatgcatcaacatatgccacaaggcaaggttcctgtacggggaccgcctaatggt 1381
Query: 780 atgttacaaggtactgttaatcctcagtatggtgtgggatatggacctcaacgatatg-c 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1380 atgttacaaggtactgttaatcctcagtatggtgtgggatatggacctcaacgatatgcc 1321
Query: 839 ccaagttcggcagttccaccaccacagacttactcttcaccaccaccgcytatgcagccg 898
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1320 ccaagttcggcagttccaccaccacagacttactcttcaccaccaccgcctatgcagccg 1261
Query: 899 caacaatttcgtccccctgtca 920
||||||||||||||||||||||
Sbjct: 1260 caacaatttcgtccccctgtca 1239
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4818
Number of Sequences: 1807
Number of extensions: 4818
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)